This directory contains three different folders:


- `python.tar/`: Contains the python modelling code.

    - `compass.py`: Computational model and agent simulation.
	
	- `plots.py`: Plotting code called by `compass.py`.
	
	
- `data.tar/`: Raw and meta morphological and physiological data. Consult the `README.md` file in this folder for further details.

	- `fz2/`:
	
		- Subfolders named `[timestamp]_[id]`. Each folder contains one data set:
		
			- `fz2_gratingPrefs_[timestamp].csv`: Configuration file. 
			
			- `[foldername].mat`: MATLAB data file containing the recording data.
			
			- `[foldername].(smr|s2rx)`: Raw data as recorded with Spike2.
			
			- `fz[id]_*.xls`, `fz[id]_spikeTimes.mat`: Meta data that are generated during data loading and analysis.
			
			- `fz[id]_overview.pdf`: Contains all kinds of analysis results in graphical form for a quick overview.
			
			- `fz[id].lif`: Confocal image stack of specimen.
			
		- `DiodeCalib/`: Contains calibration files for the experimental setup.
		
		- `fz2-response-table.xlsx`: Numeric evaluation data for the data sets.
		
	- `fz2_metadata.xlsx`: Meta data for each data set.


- `matlab.tar/`: Contains matlab code for data analysis. Consult the `README.md` file in this folder for further details and instructions to load the data.